Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 SPCS2P4-201ENST00000436160 681 ntBASIC16.49■□□□□ 0.23
SCAMP4Q969E2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 AL592309.1-201ENST00000443127 649 ntBASIC16.49■□□□□ 0.23
SCAMP4Q969E2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 AC004835.2-201ENST00000603762 682 ntBASIC16.49■□□□□ 0.23
SCAMP4Q969E2 AC027612.4-201ENST00000605371 583 ntBASIC16.49■□□□□ 0.23
SCAMP4Q969E2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAMP4Q969E2 GPAA1P2-202ENST00000606848 1787 ntBASIC16.49■□□□□ 0.23
SCAMP4Q969E2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 AC092183.1-201ENST00000469884 875 ntBASIC16.48■□□□□ 0.23
SCAMP4Q969E2 KRT18P34-201ENST00000488218 1270 ntBASIC16.48■□□□□ 0.23
SCAMP4Q969E2 AC069335.1-201ENST00000489972 472 ntBASIC16.48■□□□□ 0.23
SCAMP4Q969E2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 AC093520.2-201ENST00000561830 333 ntBASIC16.48■□□□□ 0.23
SCAMP4Q969E2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCAMP4Q969E2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms