Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP13Q92995 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP13Q92995 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.42■□□□□ 0.38
USP13Q92995 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
USP13Q92995 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.42■□□□□ 0.38
USP13Q92995 KRT8P49-201ENST00000604166 1432 ntBASIC17.42■□□□□ 0.38
USP13Q92995 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP13Q92995 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.42■□□□□ 0.38
USP13Q92995 PMS2P4-201ENST00000412466 1052 ntBASIC17.42■□□□□ 0.38
USP13Q92995 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.42■□□□□ 0.38
USP13Q92995 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.42■□□□□ 0.38
USP13Q92995 CNN2P2-201ENST00000443536 909 ntBASIC17.42■□□□□ 0.38
USP13Q92995 CNN2P3-201ENST00000450201 906 ntBASIC17.42■□□□□ 0.38
USP13Q92995 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.42■□□□□ 0.38
USP13Q92995 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.42■□□□□ 0.38
USP13Q92995 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.42■□□□□ 0.38
USP13Q92995 KRT8P23-201ENST00000560090 1207 ntBASIC17.42■□□□□ 0.38
USP13Q92995 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP13Q92995 MIR3909-201ENST00000579518 119 ntBASIC17.42■□□□□ 0.38
USP13Q92995 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP13Q92995 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP13Q92995 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP13Q92995 AL136317.3-201ENST00000618497 906 ntBASIC17.42■□□□□ 0.38
USP13Q92995 AP001350.2-201ENST00000625104 1094 ntBASIC17.42■□□□□ 0.38
USP13Q92995 AC084121.4-201ENST00000641598 221 ntBASIC17.42■□□□□ 0.38
USP13Q92995 AF228730.8-201ENST00000642140 221 ntBASIC17.42■□□□□ 0.38
USP13Q92995 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP13Q92995 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP13Q92995 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP13Q92995 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.42■□□□□ 0.38
USP13Q92995 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.42■□□□□ 0.38
USP13Q92995 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.42■□□□□ 0.38
USP13Q92995 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
USP13Q92995 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.42■□□□□ 0.38
USP13Q92995 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.42■□□□□ 0.38
USP13Q92995 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP13Q92995 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP13Q92995 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
USP13Q92995 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.41■□□□□ 0.38
USP13Q92995 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
USP13Q92995 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.41■□□□□ 0.38
USP13Q92995 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.41■□□□□ 0.38
USP13Q92995 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.41■□□□□ 0.38
USP13Q92995 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.41■□□□□ 0.38
USP13Q92995 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.41■□□□□ 0.38
USP13Q92995 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 AC069262.1-201ENST00000539058 672 ntBASIC17.41■□□□□ 0.38
USP13Q92995 AC051619.7-201ENST00000568314 623 ntBASIC17.41■□□□□ 0.38
USP13Q92995 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.41■□□□□ 0.38
USP13Q92995 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
USP13Q92995 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
USP13Q92995 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.41■□□□□ 0.38
USP13Q92995 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
USP13Q92995 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.41■□□□□ 0.38
USP13Q92995 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
USP13Q92995 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP13Q92995 AL021920.2-201ENST00000624828 1351 ntBASIC17.4■□□□□ 0.38
USP13Q92995 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.4■□□□□ 0.38
USP13Q92995 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP13Q92995 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP13Q92995 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP13Q92995 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP13Q92995 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.4■□□□□ 0.38
USP13Q92995 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP13Q92995 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP13Q92995 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP13Q92995 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
USP13Q92995 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP13Q92995 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP13Q92995 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.4■□□□□ 0.38
USP13Q92995 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP13Q92995 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.4■□□□□ 0.38
USP13Q92995 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.4■□□□□ 0.38
USP13Q92995 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP13Q92995 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.4■□□□□ 0.38
USP13Q92995 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.4■□□□□ 0.38
USP13Q92995 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.4■□□□□ 0.38
USP13Q92995 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
USP13Q92995 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.4■□□□□ 0.38
USP13Q92995 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.4■□□□□ 0.38
USP13Q92995 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.4■□□□□ 0.38
USP13Q92995 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.4■□□□□ 0.38
USP13Q92995 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms