Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERVK_113Q902F9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.67■□□□□ 0.42
HERVK_113Q902F9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERVK_113Q902F9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERVK_113Q902F9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERVK_113Q902F9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERVK_113Q902F9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HERVK_113Q902F9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 CTBP2P5-201ENST00000454986 1264 ntBASIC17.66■□□□□ 0.42
HERVK_113Q902F9 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 TIMM17BP1-201ENST00000545713 516 ntBASIC17.66■□□□□ 0.42
HERVK_113Q902F9 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 AC074044.1-201ENST00000609673 707 ntBASIC17.66■□□□□ 0.42
HERVK_113Q902F9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.66■□□□□ 0.42
HERVK_113Q902F9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 AL355994.2-201ENST00000447882 704 ntBASIC17.65■□□□□ 0.42
HERVK_113Q902F9 KLF2P4-201ENST00000451959 1225 ntBASIC17.65■□□□□ 0.42
HERVK_113Q902F9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 SLC25A47P1-201ENST00000531577 414 ntBASIC17.65■□□□□ 0.42
HERVK_113Q902F9 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 PDIA3P1-201ENST00000471856 1510 ntBASIC17.65■□□□□ 0.42
HERVK_113Q902F9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.65■□□□□ 0.42
HERVK_113Q902F9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.64■□□□□ 0.42
HERVK_113Q902F9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HERVK_113Q902F9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HERVK_113Q902F9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 AC103810.3-201ENST00000583567 96 ntBASIC17.64■□□□□ 0.41
HERVK_113Q902F9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HERVK_113Q902F9 SNX33P1-201ENST00000592116 1762 ntBASIC17.63■□□□□ 0.41
HERVK_113Q902F9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HERVK_113Q902F9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.63■□□□□ 0.41
HERVK_113Q902F9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms