Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 AL596325.1-201ENST00000563991 1082 ntBASIC20.34■□□□□ 0.85
RTL9Q8NET4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 AC009118.2-201ENST00000613275 655 ntBASIC20.34■□□□□ 0.85
RTL9Q8NET4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTL9Q8NET4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTL9Q8NET4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTL9Q8NET4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTL9Q8NET4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
RTL9Q8NET4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTL9Q8NET4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTL9Q8NET4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.33■□□□□ 0.85
RTL9Q8NET4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTL9Q8NET4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
RTL9Q8NET4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RTL9Q8NET4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RTL9Q8NET4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.33■□□□□ 0.84
RTL9Q8NET4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RTL9Q8NET4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.33■□□□□ 0.84
RTL9Q8NET4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTL9Q8NET4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
RTL9Q8NET4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTL9Q8NET4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.33■□□□□ 0.84
RTL9Q8NET4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTL9Q8NET4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RTL9Q8NET4 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.33■□□□□ 0.84
RTL9Q8NET4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.33■□□□□ 0.84
RTL9Q8NET4 COX5BP8-201ENST00000416911 349 ntBASIC20.33■□□□□ 0.84
RTL9Q8NET4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RTL9Q8NET4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.33■□□□□ 0.84
RTL9Q8NET4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.33■□□□□ 0.84
RTL9Q8NET4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.33■□□□□ 0.84
RTL9Q8NET4 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.33■□□□□ 0.84
RTL9Q8NET4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RTL9Q8NET4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.33■□□□□ 0.84
RTL9Q8NET4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.33■□□□□ 0.84
RTL9Q8NET4 AL079307.3-201ENST00000556114 283 ntBASIC20.33■□□□□ 0.84
RTL9Q8NET4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.33■□□□□ 0.84
RTL9Q8NET4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTL9Q8NET4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTL9Q8NET4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.32■□□□□ 0.84
RTL9Q8NET4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RTL9Q8NET4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RTL9Q8NET4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RTL9Q8NET4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.32■□□□□ 0.84
RTL9Q8NET4 PIN1P1-201ENST00000412108 996 ntBASIC20.32■□□□□ 0.84
RTL9Q8NET4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 SPTLC1P1-201ENST00000447199 261 ntBASIC20.32■□□□□ 0.84
RTL9Q8NET4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.32■□□□□ 0.84
RTL9Q8NET4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.32■□□□□ 0.84
RTL9Q8NET4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RTL9Q8NET4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.32■□□□□ 0.84
RTL9Q8NET4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.32■□□□□ 0.84
RTL9Q8NET4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.32■□□□□ 0.84
RTL9Q8NET4 AC009407.1-201ENST00000568958 598 ntBASIC20.32■□□□□ 0.84
RTL9Q8NET4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.32■□□□□ 0.84
RTL9Q8NET4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
RTL9Q8NET4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL9Q8NET4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.31■□□□□ 0.84
RTL9Q8NET4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RTL9Q8NET4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.31■□□□□ 0.84
RTL9Q8NET4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms