Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 FAM197Y3-203ENST00000618346 717 ntBASIC14.59□□□□□ -0.07
CPEB3Q8NE35 AC004877.2-201ENST00000623941 599 ntBASIC14.59□□□□□ -0.07
CPEB3Q8NE35 AP001350.2-201ENST00000625104 1094 ntBASIC14.59□□□□□ -0.07
CPEB3Q8NE35 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.58□□□□□ -0.07
CPEB3Q8NE35 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.58□□□□□ -0.07
CPEB3Q8NE35 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.58□□□□□ -0.07
CPEB3Q8NE35 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CPEB3Q8NE35 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPEB3Q8NE35 KRT8P39-201ENST00000396270 1433 ntBASIC14.58□□□□□ -0.07
CPEB3Q8NE35 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.58□□□□□ -0.07
CPEB3Q8NE35 AL512652.2-201ENST00000625156 1716 ntBASIC14.58□□□□□ -0.07
CPEB3Q8NE35 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.58□□□□□ -0.07
CPEB3Q8NE35 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 MIR574-201ENST00000385209 96 ntBASIC14.58□□□□□ -0.08
CPEB3Q8NE35 MIR940-201ENST00000401276 94 ntBASIC14.58□□□□□ -0.08
CPEB3Q8NE35 MED15P5-201ENST00000423150 992 ntBASIC14.58□□□□□ -0.08
CPEB3Q8NE35 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 AP000347.1-202ENST00000435868 847 ntBASIC14.58□□□□□ -0.08
CPEB3Q8NE35 KRT18P3-201ENST00000451602 1288 ntBASIC14.58□□□□□ -0.08
CPEB3Q8NE35 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.58□□□□□ -0.08
CPEB3Q8NE35 AC023141.13-201ENST00000604991 943 ntBASIC14.58□□□□□ -0.08
CPEB3Q8NE35 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 AL645728.2-201ENST00000641974 660 ntBASIC14.58□□□□□ -0.08
CPEB3Q8NE35 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 AC025580.3-201ENST00000617932 1424 ntBASIC14.58□□□□□ -0.08
CPEB3Q8NE35 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPEB3Q8NE35 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 AC079328.2-201ENST00000561241 3354 ntBASIC14.57□□□□□ -0.08
CPEB3Q8NE35 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 HLA-J-202ENST00000469281 1241 ntBASIC14.57□□□□□ -0.08
CPEB3Q8NE35 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 RNA5SP416-201ENST00000516838 111 ntBASIC14.57□□□□□ -0.08
CPEB3Q8NE35 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 AL031432.2-201ENST00000566714 459 ntBASIC14.57□□□□□ -0.08
CPEB3Q8NE35 AL928711.1-201ENST00000570165 459 ntBASIC14.57□□□□□ -0.08
CPEB3Q8NE35 AC007064.4-201ENST00000637740 555 ntBASIC14.57□□□□□ -0.08
CPEB3Q8NE35 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.57□□□□□ -0.08
CPEB3Q8NE35 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPEB3Q8NE35 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.56□□□□□ -0.08
CPEB3Q8NE35 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms