Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 PAWRP1-201ENST00000451083 565 ntBASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 AP001350.2-201ENST00000625104 1094 ntBASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 AL512652.2-201ENST00000625156 1716 ntBASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 AC099063.4-201ENST00000641099 1602 ntBASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 AL589182.2-201ENST00000619332 1049 ntBASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 AL022326.1-202ENST00000641533 845 ntBASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC01561Q8N1V8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 AC092364.2-201ENST00000596710 2692 ntBASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LINC01561Q8N1V8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms