Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 AC021097.1-201ENST00000607902 574 ntBASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC65Q8IXS2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 NFIC-211ENST00000641145 8399 ntBASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 SLC25A1P1-201ENST00000528351 927 ntBASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 AC106730.1-201ENST00000566722 1090 ntBASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 MIR3909-201ENST00000579518 119 ntBASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 AC020765.3-201ENST00000613051 740 ntBASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 BCAR1-209ENST00000546196 1340 ntBASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC65Q8IXS2 PCGF3-213ENST00000620529 1899 ntBASIC18.46■□□□□ 0.54
CCDC65Q8IXS2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC65Q8IXS2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 PMS2P4-201ENST00000412466 1052 ntBASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 KRT18P2-201ENST00000447938 1258 ntBASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 AC018845.2-201ENST00000568326 409 ntBASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 AC004877.2-201ENST00000623941 599 ntBASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 AC006449.5-201ENST00000610658 2098 ntBASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC65Q8IXS2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms