Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 BX842568.4-201ENST00000421222 227 ntBASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 AC099522.2-201ENST00000607001 744 ntBASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 AL161645.1-201ENST00000622716 1255 ntBASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 AC092902.6-201ENST00000641783 218 ntBASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PPP4R3AQ6IN85 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 GPAA1P2-202ENST00000606848 1787 ntBASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 AC092171.3-201ENST00000610122 2651 ntBASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 UBALD1-205ENST00000590891 2641 ntBASIC18.87■□□□□ 0.61
PPP4R3AQ6IN85 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPP4R3AQ6IN85 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms