Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 AC007613.1-201ENST00000572811 2597 ntBASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 RPL13P2-201ENST00000440687 659 ntBASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 MIR4321-201ENST00000592276 80 ntBASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 FO681548.1-201ENST00000455617 1132 ntBASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 GPAA1P2-202ENST00000606848 1787 ntBASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
VPS13DQ5THJ4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 NME4-207ENST00000450036 985 ntTSL 3 BASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 AC020765.3-201ENST00000613051 740 ntBASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VPS13DQ5THJ4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms