Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 IGHV3-47-201ENST00000425060 335 ntBASIC16.84■□□□□ 0.29
LGSNQ5TDP6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 AL590326.2-201ENST00000625139 305 ntBASIC16.84■□□□□ 0.29
LGSNQ5TDP6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LGSNQ5TDP6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LGSNQ5TDP6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
LGSNQ5TDP6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LGSNQ5TDP6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
LGSNQ5TDP6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LGSNQ5TDP6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
LGSNQ5TDP6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.83■□□□□ 0.29
LGSNQ5TDP6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
LGSNQ5TDP6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 PRYP5-201ENST00000451909 266 ntBASIC16.83■□□□□ 0.28
LGSNQ5TDP6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 TOB2P1-201ENST00000469761 992 ntBASIC16.83■□□□□ 0.28
LGSNQ5TDP6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 TPSP2-201ENST00000561760 610 ntBASIC16.83■□□□□ 0.28
LGSNQ5TDP6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 AC005332.1-201ENST00000577698 1310 ntBASIC16.83■□□□□ 0.28
LGSNQ5TDP6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LGSNQ5TDP6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 AL031133.1-201ENST00000406807 723 ntBASIC16.82■□□□□ 0.28
LGSNQ5TDP6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 AL353135.1-201ENST00000606729 504 ntBASIC16.82■□□□□ 0.28
LGSNQ5TDP6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms