Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 FAM220BP-201ENST00000377689 816 ntBASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 AC015922.1-201ENST00000421102 1152 ntBASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 TERF1P3-201ENST00000505638 1227 ntBASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 AC008761.3-201ENST00000624803 892 ntBASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.91□□□□□ -0.02
RNFT1Q5M7Z0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms