Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 HLA-J-202ENST00000469281 1241 ntBASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 AC087641.1-201ENST00000557561 1021 ntBASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 AP001350.2-201ENST00000625104 1094 ntBASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 AL118508.1-201ENST00000613502 2345 ntBASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.6■□□□□ 0.57
HERC4Q5GLZ8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 IGLL3P-201ENST00000412472 434 ntBASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 HCG4-201ENST00000418983 998 ntBASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 MKNK2P1-201ENST00000437526 628 ntBASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 HCG4B-203ENST00000450128 991 ntBASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HERC4Q5GLZ8 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.58■□□□□ 0.57
HERC4Q5GLZ8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HERC4Q5GLZ8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.58■□□□□ 0.57
HERC4Q5GLZ8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HERC4Q5GLZ8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HERC4Q5GLZ8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HERC4Q5GLZ8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HERC4Q5GLZ8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HERC4Q5GLZ8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HERC4Q5GLZ8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.58■□□□□ 0.57
HERC4Q5GLZ8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 AC124067.4-201ENST00000519691 2379 ntBASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 AC012569.1-201ENST00000591191 1524 ntBASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HERC4Q5GLZ8 KRT8P39-201ENST00000396270 1433 ntBASIC18.57■□□□□ 0.56
HERC4Q5GLZ8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HERC4Q5GLZ8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.57■□□□□ 0.56
HERC4Q5GLZ8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HERC4Q5GLZ8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HERC4Q5GLZ8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HERC4Q5GLZ8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HERC4Q5GLZ8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HERC4Q5GLZ8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HERC4Q5GLZ8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.57■□□□□ 0.56
HERC4Q5GLZ8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.57■□□□□ 0.56
HERC4Q5GLZ8 AL513480.1-201ENST00000451731 511 ntBASIC18.57■□□□□ 0.56
HERC4Q5GLZ8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.57■□□□□ 0.56
HERC4Q5GLZ8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms