Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 SPDYE18-201ENST00000510091 1050 ntBASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 AL079307.3-201ENST00000556114 283 ntBASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 AL662799.1-202ENST00000614205 422 ntBASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 AC080080.1-201ENST00000625121 2420 ntBASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.26■□□□□ 0.67
SHROOM1Q2M3G4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 CETN4P-206ENST00000642099 2168 ntBASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 AC078925.2-201ENST00000624013 1973 ntBASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 GNAQP1-201ENST00000444815 1067 ntBASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 AL512361.1-201ENST00000554200 418 ntBASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 AC025048.6-201ENST00000634326 1161 ntBASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 AL589702.1-201ENST00000641229 1509 ntBASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHROOM1Q2M3G4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 AL035456.1-201ENST00000456064 1369 ntBASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 AL139011.1-202ENST00000642063 584 ntBASIC19.24■□□□□ 0.67
SHROOM1Q2M3G4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms