Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ODF4Q2M2E3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 DUX4L17-201ENST00000557360 1267 ntBASIC14.8□□□□□ -0.04
ODF4Q2M2E3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.8□□□□□ -0.04
ODF4Q2M2E3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 MIR600HG-201ENST00000449175 5984 ntBASIC14.79□□□□□ -0.04
ODF4Q2M2E3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ODF4Q2M2E3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms