Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
PDS5AQ29RF7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
PDS5AQ29RF7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PDS5AQ29RF7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDS5AQ29RF7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
PDS5AQ29RF7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PDS5AQ29RF7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.77■□□□□ 0.75
PDS5AQ29RF7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDS5AQ29RF7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDS5AQ29RF7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 SPDYE17-201ENST00000412399 783 ntBASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AL589739.1-201ENST00000607720 493 ntBASIC19.76■□□□□ 0.75
PDS5AQ29RF7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AC022144.1-201ENST00000602255 1580 ntBASIC19.76■□□□□ 0.75
PDS5AQ29RF7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.76■□□□□ 0.75
PDS5AQ29RF7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AL512638.1-201ENST00000457493 794 ntBASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 POU5F1P6-201ENST00000466990 990 ntBASIC19.76■□□□□ 0.75
PDS5AQ29RF7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AC138761.1-201ENST00000584393 385 ntBASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AC026979.3-201ENST00000607315 403 ntBASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AL365330.1-201ENST00000607459 531 ntBASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 AC008761.3-201ENST00000624803 892 ntBASIC19.76■□□□□ 0.75
PDS5AQ29RF7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.76■□□□□ 0.75
PDS5AQ29RF7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 RNF216P1-203ENST00000404404 2427 ntBASIC19.75■□□□□ 0.75
PDS5AQ29RF7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 AC236430.1-201ENST00000402231 743 ntBASIC19.75■□□□□ 0.75
PDS5AQ29RF7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDS5AQ29RF7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDS5AQ29RF7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms