Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX3P78415 KRT8P49-201ENST00000604166 1432 ntBASIC19.35■□□□□ 0.69
IRX3P78415 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX3P78415 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.35■□□□□ 0.69
IRX3P78415 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX3P78415 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX3P78415 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
IRX3P78415 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
IRX3P78415 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IRX3P78415 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX3P78415 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
IRX3P78415 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.35■□□□□ 0.69
IRX3P78415 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.35■□□□□ 0.69
IRX3P78415 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.35■□□□□ 0.69
IRX3P78415 AC004890.2-204ENST00000481968 304 ntBASIC19.35■□□□□ 0.69
IRX3P78415 KRT18P34-201ENST00000488218 1270 ntBASIC19.35■□□□□ 0.69
IRX3P78415 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.35■□□□□ 0.69
IRX3P78415 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.35■□□□□ 0.69
IRX3P78415 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.35■□□□□ 0.69
IRX3P78415 RARRES2P9-201ENST00000565168 469 ntBASIC19.35■□□□□ 0.69
IRX3P78415 AC018529.1-201ENST00000613063 361 ntBASIC19.35■□□□□ 0.69
IRX3P78415 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX3P78415 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
IRX3P78415 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.35■□□□□ 0.69
IRX3P78415 AL136379.1-201ENST00000623471 2642 ntBASIC19.35■□□□□ 0.69
IRX3P78415 AC135050.7-201ENST00000624508 2218 ntBASIC19.35■□□□□ 0.69
IRX3P78415 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX3P78415 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
IRX3P78415 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
IRX3P78415 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.34■□□□□ 0.69
IRX3P78415 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IRX3P78415 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IRX3P78415 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IRX3P78415 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IRX3P78415 AC142381.1-201ENST00000426099 345 ntBASIC19.34■□□□□ 0.69
IRX3P78415 CRB3P1-201ENST00000449338 276 ntBASIC19.34■□□□□ 0.69
IRX3P78415 GAPDHP21-201ENST00000450301 1010 ntBASIC19.34■□□□□ 0.69
IRX3P78415 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.34■□□□□ 0.69
IRX3P78415 SERBP1P5-201ENST00000510079 1181 ntBASIC19.34■□□□□ 0.69
IRX3P78415 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.34■□□□□ 0.69
IRX3P78415 AC027307.3-201ENST00000594262 1100 ntBASIC19.34■□□□□ 0.69
IRX3P78415 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
IRX3P78415 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IRX3P78415 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.34■□□□□ 0.69
IRX3P78415 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IRX3P78415 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IRX3P78415 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IRX3P78415 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IRX3P78415 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.34■□□□□ 0.69
IRX3P78415 AC100757.3-201ENST00000622361 1406 ntBASIC19.34■□□□□ 0.69
IRX3P78415 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
IRX3P78415 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
IRX3P78415 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
IRX3P78415 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
IRX3P78415 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX3P78415 SLC25A1P3-201ENST00000395415 828 ntBASIC19.33■□□□□ 0.68
IRX3P78415 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX3P78415 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.33■□□□□ 0.68
IRX3P78415 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IRX3P78415 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.33■□□□□ 0.68
IRX3P78415 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.33■□□□□ 0.68
IRX3P78415 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.33■□□□□ 0.68
IRX3P78415 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.33■□□□□ 0.68
IRX3P78415 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
IRX3P78415 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.33■□□□□ 0.68
IRX3P78415 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX3P78415 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX3P78415 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX3P78415 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX3P78415 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
IRX3P78415 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX3P78415 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
IRX3P78415 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
IRX3P78415 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX3P78415 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.33■□□□□ 0.68
IRX3P78415 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX3P78415 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
IRX3P78415 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IRX3P78415 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
IRX3P78415 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.32■□□□□ 0.68
IRX3P78415 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IRX3P78415 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IRX3P78415 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX3P78415 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
IRX3P78415 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
IRX3P78415 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.32■□□□□ 0.68
IRX3P78415 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX3P78415 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX3P78415 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IRX3P78415 GK-202ENST00000378941 458 ntTSL 3 BASIC19.32■□□□□ 0.68
IRX3P78415 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.32■□□□□ 0.68
IRX3P78415 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.32■□□□□ 0.68
IRX3P78415 AP005018.1-201ENST00000525475 301 ntBASIC19.32■□□□□ 0.68
IRX3P78415 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IRX3P78415 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.32■□□□□ 0.68
IRX3P78415 AC009118.2-201ENST00000613275 655 ntBASIC19.32■□□□□ 0.68
IRX3P78415 AL590560.3-201ENST00000623350 461 ntBASIC19.32■□□□□ 0.68
IRX3P78415 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX3P78415 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX3P78415 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms