Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
UBE2D3P61077 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D3P61077 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 FES-204ENST00000414248 2327 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D3P61077 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
UBE2D3P61077 NCF1C-201ENST00000438382 1427 ntBASIC11.9□□□□□ -0.5
UBE2D3P61077 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D3P61077 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.9□□□□□ -0.5
UBE2D3P61077 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC11.9□□□□□ -0.5
UBE2D3P61077 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
UBE2D3P61077 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
UBE2D3P61077 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 TERC-201ENST00000602385 541 ntBASIC11.9□□□□□ -0.5
UBE2D3P61077 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.9□□□□□ -0.5
UBE2D3P61077 AP001269.4-201ENST00000609611 512 ntBASIC11.9□□□□□ -0.5
UBE2D3P61077 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.9□□□□□ -0.5
UBE2D3P61077 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D3P61077 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
UBE2D3P61077 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
UBE2D3P61077 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
UBE2D3P61077 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
UBE2D3P61077 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
UBE2D3P61077 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.9□□□□□ -0.51
UBE2D3P61077 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
UBE2D3P61077 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
UBE2D3P61077 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
UBE2D3P61077 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
UBE2D3P61077 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.89□□□□□ -0.51
UBE2D3P61077 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
UBE2D3P61077 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
UBE2D3P61077 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
UBE2D3P61077 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
UBE2D3P61077 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.89□□□□□ -0.51
UBE2D3P61077 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 AC132008.2-207ENST00000454517 770 ntBASIC11.89□□□□□ -0.51
UBE2D3P61077 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 BX005266.1-201ENST00000473402 457 ntBASIC11.89□□□□□ -0.51
UBE2D3P61077 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
UBE2D3P61077 KRT18P35-201ENST00000510488 1269 ntBASIC11.89□□□□□ -0.51
UBE2D3P61077 AC106795.1-205ENST00000512851 1056 ntBASIC11.89□□□□□ -0.51
UBE2D3P61077 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.89□□□□□ -0.51
UBE2D3P61077 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.89□□□□□ -0.51
UBE2D3P61077 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.89□□□□□ -0.51
UBE2D3P61077 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 AL022326.1-202ENST00000641533 845 ntBASIC11.89□□□□□ -0.51
UBE2D3P61077 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC11.89□□□□□ -0.51
UBE2D3P61077 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
UBE2D3P61077 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D3P61077 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D3P61077 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
UBE2D3P61077 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2D3P61077 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D3P61077 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D3P61077 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms