Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PDX1P52945 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PDX1P52945 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDX1P52945 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDX1P52945 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PDX1P52945 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PDX1P52945 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PDX1P52945 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.15■□□□□ 0.18
PDX1P52945 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PDX1P52945 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PDX1P52945 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 WASH6P-202ENST00000359512 1437 ntBASIC16.15■□□□□ 0.18
PDX1P52945 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.15■□□□□ 0.18
PDX1P52945 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 RNU1-129P-201ENST00000384064 167 ntBASIC16.15■□□□□ 0.18
PDX1P52945 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PDX1P52945 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 AC190387.1-201ENST00000551683 408 ntBASIC16.15■□□□□ 0.18
PDX1P52945 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PDX1P52945 U1.21-201ENST00000580816 167 ntBASIC16.15■□□□□ 0.18
PDX1P52945 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.15■□□□□ 0.18
PDX1P52945 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PDX1P52945 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
PDX1P52945 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.15■□□□□ 0.18
PDX1P52945 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDX1P52945 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PDX1P52945 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
PDX1P52945 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PDX1P52945 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PDX1P52945 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDX1P52945 AC060834.1-201ENST00000443027 2032 ntBASIC16.14■□□□□ 0.17
PDX1P52945 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.14■□□□□ 0.17
PDX1P52945 AC093525.9-201ENST00000624961 1746 ntBASIC16.14■□□□□ 0.17
PDX1P52945 OR6D1P-203ENST00000641209 4860 ntBASIC16.14■□□□□ 0.17
PDX1P52945 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDX1P52945 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDX1P52945 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDX1P52945 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDX1P52945 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDX1P52945 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDX1P52945 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.14■□□□□ 0.17
PDX1P52945 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.14■□□□□ 0.17
PDX1P52945 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PDX1P52945 AC015922.1-201ENST00000421102 1152 ntBASIC16.14■□□□□ 0.17
PDX1P52945 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.14■□□□□ 0.17
PDX1P52945 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.14■□□□□ 0.17
PDX1P52945 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.14■□□□□ 0.17
PDX1P52945 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.14■□□□□ 0.17
PDX1P52945 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDX1P52945 AC087641.1-201ENST00000557561 1021 ntBASIC16.14■□□□□ 0.17
PDX1P52945 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDX1P52945 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.14■□□□□ 0.17
PDX1P52945 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.14■□□□□ 0.17
PDX1P52945 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.14■□□□□ 0.17
PDX1P52945 AL390754.1-201ENST00000619088 582 ntBASIC16.14■□□□□ 0.17
PDX1P52945 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDX1P52945 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PDX1P52945 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDX1P52945 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PDX1P52945 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PDX1P52945 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PDX1P52945 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
PDX1P52945 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.14■□□□□ 0.17
PDX1P52945 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
PDX1P52945 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PDX1P52945 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.13■□□□□ 0.17
PDX1P52945 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PDX1P52945 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PDX1P52945 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.13■□□□□ 0.17
PDX1P52945 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.13■□□□□ 0.17
PDX1P52945 HCG4-201ENST00000418983 998 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms