Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC142381.1-201ENST00000426099 345 ntBASIC18.32■□□□□ 0.52
RFC5P40937 RBPMS2P1-201ENST00000437762 623 ntBASIC18.32■□□□□ 0.52
RFC5P40937 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RFC5P40937 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.32■□□□□ 0.52
RFC5P40937 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.32■□□□□ 0.52
RFC5P40937 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.32■□□□□ 0.52
RFC5P40937 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RFC5P40937 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.32■□□□□ 0.52
RFC5P40937 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.32■□□□□ 0.52
RFC5P40937 AC073439.1-201ENST00000624121 1774 ntBASIC18.32■□□□□ 0.52
RFC5P40937 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RFC5P40937 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC5P40937 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RFC5P40937 GGT4P-201ENST00000623672 1708 ntBASIC18.32■□□□□ 0.52
RFC5P40937 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.31■□□□□ 0.52
RFC5P40937 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.31■□□□□ 0.52
RFC5P40937 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFC5P40937 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC5P40937 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC5P40937 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RFC5P40937 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.31■□□□□ 0.52
RFC5P40937 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC5P40937 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
RFC5P40937 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.31■□□□□ 0.52
RFC5P40937 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.31■□□□□ 0.52
RFC5P40937 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.31■□□□□ 0.52
RFC5P40937 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.31■□□□□ 0.52
RFC5P40937 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.31■□□□□ 0.52
RFC5P40937 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.31■□□□□ 0.52
RFC5P40937 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.31■□□□□ 0.52
RFC5P40937 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC5P40937 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RFC5P40937 AC027796.2-201ENST00000575326 344 ntBASIC18.31■□□□□ 0.52
RFC5P40937 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.31■□□□□ 0.52
RFC5P40937 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.31■□□□□ 0.52
RFC5P40937 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.31■□□□□ 0.52
RFC5P40937 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.31■□□□□ 0.52
RFC5P40937 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.31■□□□□ 0.52
RFC5P40937 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC5P40937 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RFC5P40937 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.31■□□□□ 0.52
RFC5P40937 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.31■□□□□ 0.52
RFC5P40937 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC5P40937 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC5P40937 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RFC5P40937 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
RFC5P40937 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RFC5P40937 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RFC5P40937 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RFC5P40937 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RFC5P40937 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.3■□□□□ 0.52
RFC5P40937 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.3■□□□□ 0.52
RFC5P40937 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RFC5P40937 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RFC5P40937 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.3■□□□□ 0.52
RFC5P40937 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.3■□□□□ 0.52
RFC5P40937 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.3■□□□□ 0.52
RFC5P40937 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RFC5P40937 RFPL4AP1-201ENST00000530883 850 ntBASIC18.3■□□□□ 0.52
RFC5P40937 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.3■□□□□ 0.52
RFC5P40937 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.3■□□□□ 0.52
RFC5P40937 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.3■□□□□ 0.52
RFC5P40937 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
RFC5P40937 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RFC5P40937 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC5P40937 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC5P40937 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFC5P40937 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC5P40937 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.29■□□□□ 0.52
RFC5P40937 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.29■□□□□ 0.52
RFC5P40937 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC5P40937 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFC5P40937 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.29■□□□□ 0.52
RFC5P40937 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.29■□□□□ 0.52
RFC5P40937 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RFC5P40937 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFC5P40937 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms