Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.56■□□□□ 0.4
RFC1P35251 HCG4B-203ENST00000450128 991 ntBASIC17.56■□□□□ 0.4
RFC1P35251 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.56■□□□□ 0.4
RFC1P35251 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.56■□□□□ 0.4
RFC1P35251 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.56■□□□□ 0.4
RFC1P35251 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RFC1P35251 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.56■□□□□ 0.4
RFC1P35251 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RFC1P35251 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.56■□□□□ 0.4
RFC1P35251 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.56■□□□□ 0.4
RFC1P35251 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.56■□□□□ 0.4
RFC1P35251 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.55■□□□□ 0.4
RFC1P35251 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.55■□□□□ 0.4
RFC1P35251 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFC1P35251 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 IL9RP2-201ENST00000423948 1312 ntBASIC17.55■□□□□ 0.4
RFC1P35251 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RFC1P35251 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.55■□□□□ 0.4
RFC1P35251 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.55■□□□□ 0.4
RFC1P35251 AC034105.1-201ENST00000563488 319 ntBASIC17.55■□□□□ 0.4
RFC1P35251 AC145285.3-201ENST00000564603 959 ntBASIC17.55■□□□□ 0.4
RFC1P35251 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.55■□□□□ 0.4
RFC1P35251 AP001350.2-201ENST00000625104 1094 ntBASIC17.55■□□□□ 0.4
RFC1P35251 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RFC1P35251 AC012569.1-201ENST00000591191 1524 ntBASIC17.55■□□□□ 0.4
RFC1P35251 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 AC006449.5-201ENST00000610658 2098 ntBASIC17.55■□□□□ 0.4
RFC1P35251 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.55■□□□□ 0.4
RFC1P35251 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 GGT4P-201ENST00000623672 1708 ntBASIC17.55■□□□□ 0.4
RFC1P35251 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 AC104109.2-201ENST00000602919 1418 ntBASIC17.55■□□□□ 0.4
RFC1P35251 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFC1P35251 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RFC1P35251 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFC1P35251 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.54■□□□□ 0.4
RFC1P35251 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
RFC1P35251 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RFC1P35251 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.54■□□□□ 0.4
RFC1P35251 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.54■□□□□ 0.4
RFC1P35251 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 ME2P1-201ENST00000426028 1970 ntBASIC17.54■□□□□ 0.4
RFC1P35251 RPL13AP23-201ENST00000480739 586 ntBASIC17.54■□□□□ 0.4
RFC1P35251 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.54■□□□□ 0.4
RFC1P35251 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.54■□□□□ 0.4
RFC1P35251 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.54■□□□□ 0.4
RFC1P35251 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.54■□□□□ 0.4
RFC1P35251 MIR4515-201ENST00000584082 81 ntBASIC17.54■□□□□ 0.4
RFC1P35251 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.54■□□□□ 0.4
RFC1P35251 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 GGT3P-204ENST00000453783 1664 ntBASIC17.54■□□□□ 0.4
RFC1P35251 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.54■□□□□ 0.4
RFC1P35251 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFC1P35251 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFC1P35251 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.53■□□□□ 0.4
RFC1P35251 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms