Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRGAP2CP0DJJ0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SRGAP2CP0DJJ0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SRGAP2CP0DJJ0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SRGAP2CP0DJJ0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRGAP2CP0DJJ0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SRGAP2CP0DJJ0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRGAP2CP0DJJ0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SRGAP2CP0DJJ0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SRGAP2CP0DJJ0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SRGAP2CP0DJJ0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.27■□□□□ 0.51
SRGAP2CP0DJJ0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.27■□□□□ 0.51
SRGAP2CP0DJJ0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 MIR346-201ENST00000362234 95 ntBASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 HMGN1P19-201ENST00000436976 333 ntBASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 Z92544.3-201ENST00000624747 417 ntBASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 AL139011.1-202ENST00000642063 584 ntBASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRGAP2CP0DJJ0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 AC084121.4-201ENST00000641598 221 ntBASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 AF228730.8-201ENST00000642140 221 ntBASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRGAP2CP0DJJ0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRGAP2CP0DJJ0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRGAP2CP0DJJ0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SRGAP2CP0DJJ0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRGAP2CP0DJJ0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRGAP2CP0DJJ0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.24■□□□□ 0.51
SRGAP2CP0DJJ0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRGAP2CP0DJJ0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SRGAP2CP0DJJ0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRGAP2CP0DJJ0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
SRGAP2CP0DJJ0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRGAP2CP0DJJ0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRGAP2CP0DJJ0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRGAP2CP0DJJ0 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.24■□□□□ 0.51
SRGAP2CP0DJJ0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms