Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.76■□□□□ 0.43
FAM228BP0C875 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FAM228BP0C875 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.76■□□□□ 0.43
FAM228BP0C875 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.76■□□□□ 0.43
FAM228BP0C875 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.76■□□□□ 0.43
FAM228BP0C875 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.76■□□□□ 0.43
FAM228BP0C875 AC087641.1-201ENST00000557561 1021 ntBASIC17.76■□□□□ 0.43
FAM228BP0C875 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.76■□□□□ 0.43
FAM228BP0C875 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.76■□□□□ 0.43
FAM228BP0C875 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.76■□□□□ 0.43
FAM228BP0C875 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
FAM228BP0C875 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.76■□□□□ 0.43
FAM228BP0C875 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM228BP0C875 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM228BP0C875 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FAM228BP0C875 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM228BP0C875 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM228BP0C875 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
FAM228BP0C875 LINC00554-201ENST00000564841 3011 ntBASIC17.76■□□□□ 0.43
FAM228BP0C875 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM228BP0C875 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.76■□□□□ 0.43
FAM228BP0C875 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM228BP0C875 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
FAM228BP0C875 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM228BP0C875 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM228BP0C875 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM228BP0C875 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
FAM228BP0C875 LINC01144-201ENST00000626198 1710 ntBASIC17.75■□□□□ 0.43
FAM228BP0C875 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM228BP0C875 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.75■□□□□ 0.43
FAM228BP0C875 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.75■□□□□ 0.43
FAM228BP0C875 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.75■□□□□ 0.43
FAM228BP0C875 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM228BP0C875 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.75■□□□□ 0.43
FAM228BP0C875 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM228BP0C875 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.75■□□□□ 0.43
FAM228BP0C875 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.75■□□□□ 0.43
FAM228BP0C875 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM228BP0C875 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.75■□□□□ 0.43
FAM228BP0C875 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM228BP0C875 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.75■□□□□ 0.43
FAM228BP0C875 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.75■□□□□ 0.43
FAM228BP0C875 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.75■□□□□ 0.43
FAM228BP0C875 AC010654.1-201ENST00000615722 808 ntBASIC17.75■□□□□ 0.43
FAM228BP0C875 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.75■□□□□ 0.43
FAM228BP0C875 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.75■□□□□ 0.43
FAM228BP0C875 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM228BP0C875 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM228BP0C875 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
FAM228BP0C875 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM228BP0C875 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
FAM228BP0C875 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.75■□□□□ 0.43
FAM228BP0C875 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
FAM228BP0C875 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
FAM228BP0C875 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
FAM228BP0C875 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM228BP0C875 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 AC129492.6-201ENST00000611383 1305 ntBASIC17.74■□□□□ 0.43
FAM228BP0C875 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
FAM228BP0C875 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.74■□□□□ 0.43
FAM228BP0C875 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
FAM228BP0C875 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
FAM228BP0C875 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
FAM228BP0C875 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.74■□□□□ 0.43
FAM228BP0C875 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
FAM228BP0C875 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
FAM228BP0C875 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
FAM228BP0C875 POU5F1P6-201ENST00000466990 990 ntBASIC17.74■□□□□ 0.43
FAM228BP0C875 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.74■□□□□ 0.43
FAM228BP0C875 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.74■□□□□ 0.43
FAM228BP0C875 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.74■□□□□ 0.43
FAM228BP0C875 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.74■□□□□ 0.43
FAM228BP0C875 AC005412.3-201ENST00000580309 715 ntBASIC17.74■□□□□ 0.43
FAM228BP0C875 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
FAM228BP0C875 GGTLC5P-201ENST00000617623 998 ntBASIC17.74■□□□□ 0.43
FAM228BP0C875 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FAM228BP0C875 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.73■□□□□ 0.43
FAM228BP0C875 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.73■□□□□ 0.43
FAM228BP0C875 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.73■□□□□ 0.43
FAM228BP0C875 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FAM228BP0C875 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
FAM228BP0C875 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FAM228BP0C875 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.73■□□□□ 0.43
FAM228BP0C875 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FAM228BP0C875 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.73■□□□□ 0.43
FAM228BP0C875 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FAM228BP0C875 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms