Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 BASP1P1-201ENST00000430708 665 ntBASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 AC125807.1-201ENST00000483097 614 ntBASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 KRT18P34-201ENST00000488218 1270 ntBASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 ALG1L8P-201ENST00000533887 760 ntBASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.67■□□□□ 0.1
RAB40ALP0C0E4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 LINC00895-201ENST00000629028 1637 ntBASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 MIR943-201ENST00000401286 94 ntBASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 AC093214.1-201ENST00000511688 1107 ntBASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB40ALP0C0E4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms