Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TPM1P09493 BX276092.5-203ENST00000456199 560 ntBASIC18.42■□□□□ 0.54
TPM1P09493 MINOS1P3-201ENST00000457048 203 ntBASIC18.42■□□□□ 0.54
TPM1P09493 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TPM1P09493 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.42■□□□□ 0.54
TPM1P09493 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TPM1P09493 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.42■□□□□ 0.54
TPM1P09493 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.42■□□□□ 0.54
TPM1P09493 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TPM1P09493 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TPM1P09493 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM1P09493 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM1P09493 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
TPM1P09493 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TPM1P09493 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM1P09493 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM1P09493 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.42■□□□□ 0.54
TPM1P09493 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.41■□□□□ 0.54
TPM1P09493 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.41■□□□□ 0.54
TPM1P09493 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.41■□□□□ 0.54
TPM1P09493 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.41■□□□□ 0.54
TPM1P09493 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.41■□□□□ 0.54
TPM1P09493 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.41■□□□□ 0.54
TPM1P09493 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 AL365209.1-201ENST00000624418 6473 ntBASIC18.41■□□□□ 0.54
TPM1P09493 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
TPM1P09493 AP002414.1-201ENST00000391405 1147 ntBASIC18.41■□□□□ 0.54
TPM1P09493 CHCHD2P8-201ENST00000429873 447 ntBASIC18.41■□□□□ 0.54
TPM1P09493 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.41■□□□□ 0.54
TPM1P09493 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.41■□□□□ 0.54
TPM1P09493 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.41■□□□□ 0.54
TPM1P09493 AL121672.3-201ENST00000608644 468 ntBASIC18.41■□□□□ 0.54
TPM1P09493 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.41■□□□□ 0.54
TPM1P09493 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TPM1P09493 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.41■□□□□ 0.54
TPM1P09493 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM1P09493 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TPM1P09493 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TPM1P09493 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.4■□□□□ 0.54
TPM1P09493 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TPM1P09493 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.4■□□□□ 0.54
TPM1P09493 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.4■□□□□ 0.54
TPM1P09493 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TPM1P09493 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.4■□□□□ 0.54
TPM1P09493 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
TPM1P09493 AL136038.3-201ENST00000561909 1096 ntBASIC18.4■□□□□ 0.54
TPM1P09493 NTF6B-201ENST00000591913 560 ntBASIC18.4■□□□□ 0.54
TPM1P09493 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TPM1P09493 Z69720.1-201ENST00000601483 472 ntBASIC18.4■□□□□ 0.54
TPM1P09493 AC013467.2-201ENST00000605472 835 ntBASIC18.4■□□□□ 0.54
TPM1P09493 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.4■□□□□ 0.54
TPM1P09493 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.4■□□□□ 0.54
TPM1P09493 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TPM1P09493 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TPM1P09493 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM1P09493 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.4■□□□□ 0.54
TPM1P09493 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TPM1P09493 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.39■□□□□ 0.54
TPM1P09493 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TPM1P09493 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TPM1P09493 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TPM1P09493 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.39■□□□□ 0.53
TPM1P09493 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TPM1P09493 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 AC006277.1-201ENST00000624348 1610 ntBASIC18.39■□□□□ 0.53
TPM1P09493 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms