Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.63■□□□□ 0.09
PDGFAP04085 FO538757.1-201ENST00000623083 1397 ntBASIC15.62■□□□□ 0.09
PDGFAP04085 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PDGFAP04085 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
PDGFAP04085 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
PDGFAP04085 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.62■□□□□ 0.09
PDGFAP04085 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.62■□□□□ 0.09
PDGFAP04085 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.62■□□□□ 0.09
PDGFAP04085 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PDGFAP04085 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.62■□□□□ 0.09
PDGFAP04085 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.62■□□□□ 0.09
PDGFAP04085 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.62■□□□□ 0.09
PDGFAP04085 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.62■□□□□ 0.09
PDGFAP04085 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.62■□□□□ 0.09
PDGFAP04085 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.62■□□□□ 0.09
PDGFAP04085 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.62■□□□□ 0.09
PDGFAP04085 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.62■□□□□ 0.09
PDGFAP04085 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.62■□□□□ 0.09
PDGFAP04085 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.62■□□□□ 0.09
PDGFAP04085 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
PDGFAP04085 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PDGFAP04085 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 CROCCP2-202ENST00000412962 2773 ntBASIC15.62■□□□□ 0.09
PDGFAP04085 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFAP04085 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.61■□□□□ 0.09
PDGFAP04085 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PDGFAP04085 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.61■□□□□ 0.09
PDGFAP04085 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PDGFAP04085 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.61■□□□□ 0.09
PDGFAP04085 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.61■□□□□ 0.09
PDGFAP04085 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.61■□□□□ 0.09
PDGFAP04085 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PDGFAP04085 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PDGFAP04085 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.61■□□□□ 0.09
PDGFAP04085 TREML5P-201ENST00000421694 576 ntBASIC15.61■□□□□ 0.09
PDGFAP04085 AC107890.1-201ENST00000422478 521 ntBASIC15.61■□□□□ 0.09
PDGFAP04085 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.61■□□□□ 0.09
PDGFAP04085 AC125807.1-201ENST00000483097 614 ntBASIC15.61■□□□□ 0.09
PDGFAP04085 TERF1P3-201ENST00000505638 1227 ntBASIC15.61■□□□□ 0.09
PDGFAP04085 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.61■□□□□ 0.09
PDGFAP04085 AC087641.1-201ENST00000557561 1021 ntBASIC15.61■□□□□ 0.09
PDGFAP04085 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.61■□□□□ 0.09
PDGFAP04085 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.61■□□□□ 0.09
PDGFAP04085 AC012645.4-201ENST00000610691 1061 ntBASIC15.61■□□□□ 0.09
PDGFAP04085 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.61■□□□□ 0.09
PDGFAP04085 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.61■□□□□ 0.09
PDGFAP04085 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.61■□□□□ 0.09
PDGFAP04085 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.61■□□□□ 0.09
PDGFAP04085 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.61■□□□□ 0.09
PDGFAP04085 AC008677.1-201ENST00000519230 1561 ntBASIC15.61■□□□□ 0.09
PDGFAP04085 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.61■□□□□ 0.09
PDGFAP04085 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFAP04085 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.61■□□□□ 0.09
PDGFAP04085 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PDGFAP04085 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms