Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.9□□□□□ -0.02
APOA1P02647 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.9□□□□□ -0.02
APOA1P02647 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
APOA1P02647 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.9□□□□□ -0.02
APOA1P02647 AL355802.2-201ENST00000402069 882 ntBASIC14.9□□□□□ -0.02
APOA1P02647 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.9□□□□□ -0.02
APOA1P02647 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.9□□□□□ -0.02
APOA1P02647 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.9□□□□□ -0.02
APOA1P02647 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 AC116562.4-202ENST00000641738 218 ntBASIC14.9□□□□□ -0.02
APOA1P02647 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.9□□□□□ -0.02
APOA1P02647 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.9□□□□□ -0.02
APOA1P02647 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.9□□□□□ -0.02
APOA1P02647 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.9□□□□□ -0.02
APOA1P02647 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
APOA1P02647 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 AL596087.1-201ENST00000400979 1969 ntBASIC14.89□□□□□ -0.03
APOA1P02647 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
APOA1P02647 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
APOA1P02647 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
APOA1P02647 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.89□□□□□ -0.03
APOA1P02647 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
APOA1P02647 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
APOA1P02647 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.89□□□□□ -0.03
APOA1P02647 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
APOA1P02647 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
APOA1P02647 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 AC096633.1-201ENST00000422446 749 ntBASIC14.89□□□□□ -0.03
APOA1P02647 AC007663.1-201ENST00000438948 1240 ntBASIC14.89□□□□□ -0.03
APOA1P02647 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.89□□□□□ -0.03
APOA1P02647 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.89□□□□□ -0.03
APOA1P02647 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.89□□□□□ -0.03
APOA1P02647 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.89□□□□□ -0.03
APOA1P02647 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
APOA1P02647 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.89□□□□□ -0.03
APOA1P02647 AC024563.2-201ENST00000603282 481 ntBASIC14.89□□□□□ -0.03
APOA1P02647 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
APOA1P02647 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.89□□□□□ -0.03
APOA1P02647 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
APOA1P02647 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.89□□□□□ -0.03
APOA1P02647 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
APOA1P02647 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.89□□□□□ -0.03
APOA1P02647 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA1P02647 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
APOA1P02647 GRK6P1-201ENST00000400595 1711 ntBASIC14.89□□□□□ -0.03
APOA1P02647 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
APOA1P02647 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA1P02647 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOA1P02647 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA1P02647 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
APOA1P02647 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA1P02647 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
APOA1P02647 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA1P02647 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.88□□□□□ -0.03
APOA1P02647 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA1P02647 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA1P02647 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.88□□□□□ -0.03
APOA1P02647 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOA1P02647 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.88□□□□□ -0.03
APOA1P02647 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.88□□□□□ -0.03
APOA1P02647 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.88□□□□□ -0.03
APOA1P02647 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.88□□□□□ -0.03
APOA1P02647 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.88□□□□□ -0.03
APOA1P02647 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.88□□□□□ -0.03
APOA1P02647 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.88□□□□□ -0.03
APOA1P02647 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms