Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PDGFBP01127 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 SLC25A24P2-201ENST00000415059 510 ntBASIC16.51■□□□□ 0.23
PDGFBP01127 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.51■□□□□ 0.23
PDGFBP01127 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.51■□□□□ 0.23
PDGFBP01127 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PDGFBP01127 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFBP01127 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.51■□□□□ 0.23
PDGFBP01127 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFBP01127 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFBP01127 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.51■□□□□ 0.23
PDGFBP01127 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.51■□□□□ 0.23
PDGFBP01127 AC074044.1-201ENST00000609673 707 ntBASIC16.51■□□□□ 0.23
PDGFBP01127 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PDGFBP01127 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFBP01127 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PDGFBP01127 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.51■□□□□ 0.23
PDGFBP01127 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PDGFBP01127 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PDGFBP01127 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.51■□□□□ 0.23
PDGFBP01127 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFBP01127 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFBP01127 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PDGFBP01127 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PDGFBP01127 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PDGFBP01127 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.5■□□□□ 0.23
PDGFBP01127 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PDGFBP01127 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PDGFBP01127 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.5■□□□□ 0.23
PDGFBP01127 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.5■□□□□ 0.23
PDGFBP01127 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.5■□□□□ 0.23
PDGFBP01127 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.5■□□□□ 0.23
PDGFBP01127 ACTG1P3-201ENST00000431775 1114 ntBASIC16.5■□□□□ 0.23
PDGFBP01127 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PDGFBP01127 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.5■□□□□ 0.23
PDGFBP01127 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.5■□□□□ 0.23
PDGFBP01127 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.5■□□□□ 0.23
PDGFBP01127 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.5■□□□□ 0.23
PDGFBP01127 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.5■□□□□ 0.23
PDGFBP01127 AC025048.3-201ENST00000590609 569 ntBASIC16.5■□□□□ 0.23
PDGFBP01127 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.5■□□□□ 0.23
PDGFBP01127 AC010328.2-201ENST00000597698 1111 ntBASIC16.5■□□□□ 0.23
PDGFBP01127 AC026979.3-201ENST00000607315 403 ntBASIC16.5■□□□□ 0.23
PDGFBP01127 AL118558.3-201ENST00000607414 1079 ntBASIC16.5■□□□□ 0.23
PDGFBP01127 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 AC005702.4-201ENST00000618393 416 ntBASIC16.5■□□□□ 0.23
PDGFBP01127 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.5■□□□□ 0.23
PDGFBP01127 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.5■□□□□ 0.23
PDGFBP01127 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDGFBP01127 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PDGFBP01127 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PDGFBP01127 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFBP01127 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PDGFBP01127 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.49■□□□□ 0.23
PDGFBP01127 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PDGFBP01127 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 AP000974.1-201ENST00000623909 2387 ntBASIC16.49■□□□□ 0.23
PDGFBP01127 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFBP01127 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.49■□□□□ 0.23
PDGFBP01127 RN7SL399P-201ENST00000471648 279 ntBASIC16.49■□□□□ 0.23
PDGFBP01127 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.49■□□□□ 0.23
PDGFBP01127 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFBP01127 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFBP01127 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.49■□□□□ 0.23
PDGFBP01127 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms