Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CLPXO76031 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.19■□□□□ 0.02
CLPXO76031 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.19■□□□□ 0.02
CLPXO76031 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CLPXO76031 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.18■□□□□ 0.02
CLPXO76031 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CLPXO76031 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CLPXO76031 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CLPXO76031 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.18■□□□□ 0.02
CLPXO76031 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.18■□□□□ 0.02
CLPXO76031 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 UPK3BP1-201ENST00000428678 509 ntBASIC15.18■□□□□ 0.02
CLPXO76031 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.18■□□□□ 0.02
CLPXO76031 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.18■□□□□ 0.02
CLPXO76031 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 YBX1P2-201ENST00000489612 999 ntBASIC15.18■□□□□ 0.02
CLPXO76031 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.18■□□□□ 0.02
CLPXO76031 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.18■□□□□ 0.02
CLPXO76031 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.18■□□□□ 0.02
CLPXO76031 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.18■□□□□ 0.02
CLPXO76031 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 AC024243.1-201ENST00000609234 778 ntBASIC15.18■□□□□ 0.02
CLPXO76031 AL358472.4-201ENST00000633140 710 ntBASIC15.18■□□□□ 0.02
CLPXO76031 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.18■□□□□ 0.02
CLPXO76031 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
CLPXO76031 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.18■□□□□ 0.02
CLPXO76031 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.18■□□□□ 0.02
CLPXO76031 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLPXO76031 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLPXO76031 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLPXO76031 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLPXO76031 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLPXO76031 AC007292.2-201ENST00000593524 1812 ntBASIC15.17■□□□□ 0.02
CLPXO76031 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.17■□□□□ 0.02
CLPXO76031 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.17■□□□□ 0.02
CLPXO76031 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.17■□□□□ 0.02
CLPXO76031 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLPXO76031 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CLPXO76031 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLPXO76031 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLPXO76031 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLPXO76031 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLPXO76031 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLPXO76031 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLPXO76031 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLPXO76031 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLPXO76031 EGFEM1P-202ENST00000431685 1563 ntBASIC15.17■□□□□ 0.02
CLPXO76031 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLPXO76031 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLPXO76031 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.17■□□□□ 0.02
CLPXO76031 AL031133.1-201ENST00000406807 723 ntBASIC15.17■□□□□ 0.02
CLPXO76031 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.17■□□□□ 0.02
CLPXO76031 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CLPXO76031 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.17■□□□□ 0.02
CLPXO76031 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms