Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA2O43364 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.68■□□□□ 0.42
HOXA2O43364 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA2O43364 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA2O43364 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.68■□□□□ 0.42
HOXA2O43364 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.68■□□□□ 0.42
HOXA2O43364 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.68■□□□□ 0.42
HOXA2O43364 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.68■□□□□ 0.42
HOXA2O43364 AC135586.1-201ENST00000539323 574 ntBASIC17.68■□□□□ 0.42
HOXA2O43364 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HOXA2O43364 AL132655.2-201ENST00000596276 594 ntBASIC17.68■□□□□ 0.42
HOXA2O43364 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA2O43364 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA2O43364 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.68■□□□□ 0.42
HOXA2O43364 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA2O43364 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HOXA2O43364 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.68■□□□□ 0.42
HOXA2O43364 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA2O43364 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.68■□□□□ 0.42
HOXA2O43364 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.68■□□□□ 0.42
HOXA2O43364 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HOXA2O43364 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA2O43364 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA2O43364 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA2O43364 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA2O43364 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HOXA2O43364 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA2O43364 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXA2O43364 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA2O43364 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA2O43364 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXA2O43364 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA2O43364 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA2O43364 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXA2O43364 COX5BP8-201ENST00000416911 349 ntBASIC17.67■□□□□ 0.42
HOXA2O43364 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.67■□□□□ 0.42
HOXA2O43364 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.67■□□□□ 0.42
HOXA2O43364 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.67■□□□□ 0.42
HOXA2O43364 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.67■□□□□ 0.42
HOXA2O43364 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HOXA2O43364 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.67■□□□□ 0.42
HOXA2O43364 TP53TG3HP-202ENST00000569755 579 ntBASIC17.67■□□□□ 0.42
HOXA2O43364 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.67■□□□□ 0.42
HOXA2O43364 AC140912.1-201ENST00000577171 1054 ntBASIC17.67■□□□□ 0.42
HOXA2O43364 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXA2O43364 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.67■□□□□ 0.42
HOXA2O43364 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.67■□□□□ 0.42
HOXA2O43364 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.67■□□□□ 0.42
HOXA2O43364 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.67■□□□□ 0.42
HOXA2O43364 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA2O43364 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXA2O43364 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA2O43364 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXA2O43364 AC007541.1-201ENST00000570282 1469 ntBASIC17.67■□□□□ 0.42
HOXA2O43364 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA2O43364 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HOXA2O43364 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXA2O43364 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA2O43364 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA2O43364 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HOXA2O43364 AL512652.2-201ENST00000625156 1716 ntBASIC17.67■□□□□ 0.42
HOXA2O43364 AL391825.1-201ENST00000457671 1364 ntBASIC17.66■□□□□ 0.42
HOXA2O43364 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 GPAA1P2-202ENST00000606848 1787 ntBASIC17.66■□□□□ 0.42
HOXA2O43364 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HOXA2O43364 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HOXA2O43364 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
HOXA2O43364 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
HOXA2O43364 AC087499.6-201ENST00000411576 835 ntBASIC17.66■□□□□ 0.42
HOXA2O43364 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
HOXA2O43364 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 DFFBP1-201ENST00000433250 979 ntBASIC17.66■□□□□ 0.42
HOXA2O43364 KRT17P7-201ENST00000451704 1104 ntBASIC17.66■□□□□ 0.42
HOXA2O43364 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HOXA2O43364 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXA2O43364 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
HOXA2O43364 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.66■□□□□ 0.42
HOXA2O43364 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.66■□□□□ 0.42
HOXA2O43364 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
HOXA2O43364 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXA2O43364 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HOXA2O43364 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXA2O43364 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
HOXA2O43364 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.66■□□□□ 0.42
HOXA2O43364 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms