Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 MIR4259-201ENST00000584466 101 ntBASIC16.22■□□□□ 0.19
C4orf47A7E2U8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 AL512343.1-201ENST00000605837 169 ntBASIC16.22■□□□□ 0.19
C4orf47A7E2U8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 REXO1L6P-201ENST00000603433 1515 ntBASIC16.22■□□□□ 0.19
C4orf47A7E2U8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 LYSMD4-203ENST00000378904 2122 ntBASIC16.22■□□□□ 0.19
C4orf47A7E2U8 AL023806.1-201ENST00000603994 1649 ntBASIC16.22■□□□□ 0.19
C4orf47A7E2U8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 RN7SL837P-201ENST00000463010 287 ntBASIC16.21■□□□□ 0.19
C4orf47A7E2U8 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.21■□□□□ 0.19
C4orf47A7E2U8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
C4orf47A7E2U8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.21■□□□□ 0.18
C4orf47A7E2U8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.21■□□□□ 0.18
C4orf47A7E2U8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
C4orf47A7E2U8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
C4orf47A7E2U8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
C4orf47A7E2U8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 FOXO1B-201ENST00000504678 1527 ntBASIC16.2■□□□□ 0.18
C4orf47A7E2U8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 PRYP6-201ENST00000514804 343 ntBASIC16.2■□□□□ 0.18
C4orf47A7E2U8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 AC105021.1-202ENST00000570572 669 ntBASIC16.2■□□□□ 0.18
C4orf47A7E2U8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 AC012313.1-201ENST00000593393 3059 ntBASIC16.2■□□□□ 0.18
C4orf47A7E2U8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C4orf47A7E2U8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.19■□□□□ 0.18
C4orf47A7E2U8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms