Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 AC108860.2-201ENST00000562760 2183 ntBASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 AC093724.1-201ENST00000448659 1027 ntBASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 KRT90P-201ENST00000549264 1064 ntBASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 AC023310.1-201ENST00000554836 735 ntBASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 AC009486.1-201ENST00000569860 813 ntBASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 FRMD8P1-201ENST00000440433 1524 ntBASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.04■□□□□ 0.64
TMEM88BA6NKF7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 Z93015.1-201ENST00000451718 390 ntBASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 HNRNPUP1-201ENST00000554987 333 ntBASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88BA6NKF7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 SOCS2P1-201ENST00000417727 557 ntBASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 AC004898.1-201ENST00000451057 766 ntBASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 BX284668.4-201ENST00000453917 508 ntBASIC19.02■□□□□ 0.64
TMEM88BA6NKF7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms