Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 GGT3P-204ENST00000453783 1664 ntBASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 AC006277.1-201ENST00000624348 1610 ntBASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 AC006449.6-201ENST00000612330 2296 ntBASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 BX664615.1-201ENST00000443558 458 ntBASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 AL592071.1-201ENST00000611956 408 ntBASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 AD001527.2-201ENST00000622994 785 ntBASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 AL139011.1-202ENST00000642063 584 ntBASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 KRT8P49-201ENST00000604166 1432 ntBASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV18A0A075B6X5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 AC002310.6-201ENST00000624451 1377 ntBASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV18A0A075B6X5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 AC073347.1-201ENST00000421633 2643 ntBASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms