Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB16Q9NRJ7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDHB16Q9NRJ7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PCDHB16Q9NRJ7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB16Q9NRJ7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB16Q9NRJ7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PCDHB16Q9NRJ7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB16Q9NRJ7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB16Q9NRJ7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB16Q9NRJ7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PCDHB16Q9NRJ7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 AC104581.4-201ENST00000623126 3052 ntBASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 AC233702.3-201ENST00000578656 1387 ntBASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB16Q9NRJ7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 DRAXINP1-201ENST00000437611 948 ntBASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 TSSC2-201ENST00000450217 709 ntBASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 INTS4P1-201ENST00000438455 1935 ntBASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 AC016734.2-201ENST00000624325 1377 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms