Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 VENTXP5-201ENST00000523979 775 ntBASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 AC124947.2-201ENST00000547118 1133 ntBASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 AC109462.3-201ENST00000573934 613 ntBASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
C12orf4Q9NQ89 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 TSPY5P-201ENST00000426936 936 ntBASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 AC112907.2-201ENST00000448639 330 ntBASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 AC092647.4-201ENST00000457211 535 ntBASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 AC111152.3-201ENST00000569699 673 ntBASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 AL513523.2-202ENST00000427283 2040 ntBASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.59□□□□□ -0.07
C12orf4Q9NQ89 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.58□□□□□ -0.07
C12orf4Q9NQ89 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.58□□□□□ -0.07
C12orf4Q9NQ89 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.58□□□□□ -0.07
C12orf4Q9NQ89 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
C12orf4Q9NQ89 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.58□□□□□ -0.07
C12orf4Q9NQ89 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
C12orf4Q9NQ89 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.58□□□□□ -0.07
C12orf4Q9NQ89 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 AC133561.5-201ENST00000635547 218 ntBASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C12orf4Q9NQ89 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms