Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 BX276092.7-203ENST00000637198 1536 ntBASIC13.55□□□□□ -0.24
NKX6-2Q9C056 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 MESTP1-201ENST00000404287 994 ntBASIC13.55□□□□□ -0.24
NKX6-2Q9C056 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 PRAL-201ENST00000624952 3286 ntBASIC13.55□□□□□ -0.24
NKX6-2Q9C056 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 AC005104.2-201ENST00000427818 678 ntBASIC13.54□□□□□ -0.24
NKX6-2Q9C056 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 AC097488.1-201ENST00000507834 756 ntBASIC13.54□□□□□ -0.24
NKX6-2Q9C056 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 AC124947.2-201ENST00000547118 1133 ntBASIC13.54□□□□□ -0.24
NKX6-2Q9C056 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 MIR4674-201ENST00000582457 87 ntBASIC13.54□□□□□ -0.24
NKX6-2Q9C056 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.54□□□□□ -0.24
NKX6-2Q9C056 AC010240.3-201ENST00000607688 395 ntBASIC13.54□□□□□ -0.24
NKX6-2Q9C056 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 LINC00167-201ENST00000530583 1419 ntBASIC13.54□□□□□ -0.24
NKX6-2Q9C056 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.54□□□□□ -0.24
NKX6-2Q9C056 AC009090.5-201ENST00000624886 2285 ntBASIC13.53□□□□□ -0.24
NKX6-2Q9C056 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 AC117489.1-201ENST00000625169 3217 ntBASIC13.53□□□□□ -0.24
NKX6-2Q9C056 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms