Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 KRT17P6-201ENST00000453795 1220 ntBASIC14.36□□□□□ -0.11
NICN1Q9BSH3 TOB2P1-201ENST00000469761 992 ntBASIC14.36□□□□□ -0.11
NICN1Q9BSH3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 TPSP2-201ENST00000561760 610 ntBASIC14.36□□□□□ -0.11
NICN1Q9BSH3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 AC243591.1-201ENST00000452967 1364 ntBASIC14.35□□□□□ -0.11
NICN1Q9BSH3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 AC006277.1-201ENST00000624348 1610 ntBASIC14.35□□□□□ -0.11
NICN1Q9BSH3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 TSSC2-201ENST00000450217 709 ntBASIC14.35□□□□□ -0.11
NICN1Q9BSH3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 AL121956.5-201ENST00000625261 221 ntBASIC14.35□□□□□ -0.11
NICN1Q9BSH3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NICN1Q9BSH3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
NICN1Q9BSH3 TMPOP1-202ENST00000424642 1267 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms