Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 AC069262.1-201ENST00000539058 672 ntBASIC16.13■□□□□ 0.17
SLC38A3Q99624 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 AP000842.3-202ENST00000569238 1080 ntBASIC16.13■□□□□ 0.17
SLC38A3Q99624 AC015911.4-201ENST00000588022 1070 ntBASIC16.13■□□□□ 0.17
SLC38A3Q99624 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.13■□□□□ 0.17
SLC38A3Q99624 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 LINC00895-201ENST00000629028 1637 ntBASIC16.12■□□□□ 0.17
SLC38A3Q99624 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 GPS2P2-201ENST00000430745 888 ntBASIC16.12■□□□□ 0.17
SLC38A3Q99624 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 AL512356.2-201ENST00000546955 174 ntBASIC16.12■□□□□ 0.17
SLC38A3Q99624 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 AC026150.2-201ENST00000564693 1156 ntBASIC16.12■□□□□ 0.17
SLC38A3Q99624 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 AC013467.2-201ENST00000605472 835 ntBASIC16.12■□□□□ 0.17
SLC38A3Q99624 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SLC38A3Q99624 AC124067.4-201ENST00000519691 2379 ntBASIC16.12■□□□□ 0.17
SLC38A3Q99624 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC38A3Q99624 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 AC011270.2-201ENST00000624293 2550 ntBASIC16.11■□□□□ 0.17
SLC38A3Q99624 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 AC084121.4-201ENST00000641598 221 ntBASIC16.11■□□□□ 0.17
SLC38A3Q99624 AF228730.8-201ENST00000642140 221 ntBASIC16.11■□□□□ 0.17
SLC38A3Q99624 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 TUBB3P1-201ENST00000405796 1332 ntBASIC16.11■□□□□ 0.17
SLC38A3Q99624 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC38A3Q99624 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SLC38A3Q99624 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms