Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 CRCP-204ENST00000398684 492 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 HNRNPABP1-201ENST00000406003 734 ntBASIC4.94□□□□□ -1.62
HMCN1Q96RW7 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 IGHV3-52-201ENST00000519770 353 ntBASIC4.94□□□□□ -1.62
HMCN1Q96RW7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AL450487.2-201ENST00000615934 407 ntBASIC4.94□□□□□ -1.62
HMCN1Q96RW7 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 RPS9P1-201ENST00000419943 583 ntBASIC4.94□□□□□ -1.62
HMCN1Q96RW7 NOC2LP1-201ENST00000450578 752 ntBASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AL161773.1-201ENST00000624845 863 ntBASIC4.94□□□□□ -1.62
HMCN1Q96RW7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 RPL13P2-201ENST00000440687 659 ntBASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AC120045.2-201ENST00000567334 178 ntBASIC4.94□□□□□ -1.62
HMCN1Q96RW7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AC254633.1-201ENST00000606790 345 ntBASIC4.94□□□□□ -1.62
HMCN1Q96RW7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AC006453.4-201ENST00000636949 1252 ntBASIC4.94□□□□□ -1.62
HMCN1Q96RW7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 CASP2-203ENST00000392925 616 ntTSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMCN1Q96RW7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HMCN1Q96RW7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms