Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 NKAPP1-205ENST00000585790 367 ntBASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 AC092329.2-201ENST00000598402 547 ntBASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 AC126177.1-201ENST00000547829 2218 ntBASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHAMP1Q96JM3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 AC104819.1-201ENST00000504587 486 ntBASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 MIR4492-201ENST00000581627 80 ntBASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 AL732292.2-201ENST00000609649 430 ntBASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHAMP1Q96JM3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHAMP1Q96JM3 SLC22A20-204ENST00000530038 1673 ntBASIC19.33■□□□□ 0.69
CHAMP1Q96JM3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.33■□□□□ 0.69
CHAMP1Q96JM3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHAMP1Q96JM3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CHAMP1Q96JM3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHAMP1Q96JM3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CHAMP1Q96JM3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CHAMP1Q96JM3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHAMP1Q96JM3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 AC023511.2-201ENST00000618803 211 ntBASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 AL513477.1-201ENST00000602865 2407 ntBASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 NCF1C-201ENST00000438382 1427 ntBASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.33■□□□□ 0.68
CHAMP1Q96JM3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms