Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SHDQ96IW2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SHDQ96IW2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.68■□□□□ 0.26
SHDQ96IW2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.68■□□□□ 0.26
SHDQ96IW2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SHDQ96IW2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.68■□□□□ 0.26
SHDQ96IW2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHDQ96IW2 CTBP2P3-201ENST00000585629 1255 ntBASIC16.68■□□□□ 0.26
SHDQ96IW2 AC013467.2-201ENST00000605472 835 ntBASIC16.68■□□□□ 0.26
SHDQ96IW2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.68■□□□□ 0.26
SHDQ96IW2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.68■□□□□ 0.26
SHDQ96IW2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SHDQ96IW2 AL033527.4-201ENST00000641026 673 ntBASIC16.68■□□□□ 0.26
SHDQ96IW2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHDQ96IW2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHDQ96IW2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.68■□□□□ 0.26
SHDQ96IW2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
SHDQ96IW2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHDQ96IW2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SHDQ96IW2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.68■□□□□ 0.26
SHDQ96IW2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SHDQ96IW2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.67■□□□□ 0.26
SHDQ96IW2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.67■□□□□ 0.26
SHDQ96IW2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.67■□□□□ 0.26
SHDQ96IW2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
SHDQ96IW2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.67■□□□□ 0.26
SHDQ96IW2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.67■□□□□ 0.26
SHDQ96IW2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.67■□□□□ 0.26
SHDQ96IW2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.67■□□□□ 0.26
SHDQ96IW2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 AC023310.3-201ENST00000557027 670 ntBASIC16.67■□□□□ 0.26
SHDQ96IW2 AC100756.1-201ENST00000562736 682 ntBASIC16.67■□□□□ 0.26
SHDQ96IW2 AC138749.3-201ENST00000567691 622 ntBASIC16.67■□□□□ 0.26
SHDQ96IW2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.67■□□□□ 0.26
SHDQ96IW2 TMEM261P1-201ENST00000604899 340 ntBASIC16.67■□□□□ 0.26
SHDQ96IW2 AC116165.1-201ENST00000611806 668 ntBASIC16.67■□□□□ 0.26
SHDQ96IW2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.67■□□□□ 0.26
SHDQ96IW2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.67■□□□□ 0.26
SHDQ96IW2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHDQ96IW2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.66■□□□□ 0.26
SHDQ96IW2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SHDQ96IW2 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.66■□□□□ 0.26
SHDQ96IW2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 AC116353.5-201ENST00000638148 1699 ntBASIC16.66■□□□□ 0.26
SHDQ96IW2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SHDQ96IW2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.66■□□□□ 0.26
SHDQ96IW2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.66■□□□□ 0.26
SHDQ96IW2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.66■□□□□ 0.26
SHDQ96IW2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.66■□□□□ 0.26
SHDQ96IW2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SHDQ96IW2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.66■□□□□ 0.26
SHDQ96IW2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.66■□□□□ 0.26
SHDQ96IW2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.66■□□□□ 0.26
SHDQ96IW2 AC104596.2-201ENST00000512793 793 ntBASIC16.66■□□□□ 0.26
SHDQ96IW2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.66■□□□□ 0.26
SHDQ96IW2 AC104989.1-201ENST00000519711 778 ntBASIC16.66■□□□□ 0.26
SHDQ96IW2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.66■□□□□ 0.26
SHDQ96IW2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.66■□□□□ 0.26
SHDQ96IW2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.66■□□□□ 0.26
SHDQ96IW2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.66■□□□□ 0.26
SHDQ96IW2 AC084346.2-201ENST00000607097 949 ntBASIC16.66■□□□□ 0.26
SHDQ96IW2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.66■□□□□ 0.26
SHDQ96IW2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 AC006277.1-201ENST00000624348 1610 ntBASIC16.66■□□□□ 0.26
SHDQ96IW2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SHDQ96IW2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHDQ96IW2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SHDQ96IW2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms