Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 PRYP6-201ENST00000514804 343 ntBASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 AC105233.2-201ENST00000523697 349 ntBASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 AF228730.5-201ENST00000530288 346 ntBASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 AC084121.4-201ENST00000641598 221 ntBASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 AF228730.8-201ENST00000642140 221 ntBASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 AL138918.1-201ENST00000568306 659 ntBASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 AP000842.3-202ENST00000569238 1080 ntBASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 AD000864.1-201ENST00000624076 2295 ntBASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCD1Q96GM5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 AC073439.1-201ENST00000624121 1774 ntBASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 AC073389.1-201ENST00000595595 795 ntBASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms