Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 CLK3P2-201ENST00000427566 1453 ntBASIC16.42■□□□□ 0.22
CLDN23Q96B33 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 KRT8P44-201ENST00000441609 1350 ntBASIC16.42■□□□□ 0.22
CLDN23Q96B33 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 AC025048.3-201ENST00000590609 569 ntBASIC16.42■□□□□ 0.22
CLDN23Q96B33 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 AC233724.13-201ENST00000598383 410 ntBASIC16.42■□□□□ 0.22
CLDN23Q96B33 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 AC020765.3-201ENST00000613051 740 ntBASIC16.42■□□□□ 0.22
CLDN23Q96B33 AC005702.4-201ENST00000618393 416 ntBASIC16.42■□□□□ 0.22
CLDN23Q96B33 AL139011.1-202ENST00000642063 584 ntBASIC16.42■□□□□ 0.22
CLDN23Q96B33 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN23Q96B33 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN23Q96B33 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN23Q96B33 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN23Q96B33 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN23Q96B33 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN23Q96B33 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CLDN23Q96B33 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN23Q96B33 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN23Q96B33 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN23Q96B33 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN23Q96B33 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN23Q96B33 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CLDN23Q96B33 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN23Q96B33 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN23Q96B33 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN23Q96B33 FO393414.2-201ENST00000405153 598 ntBASIC16.41■□□□□ 0.22
CLDN23Q96B33 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms