Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20■□□□□ 0.79
SNED1Q8TER0 AP005482.1-201ENST00000563722 1273 ntBASIC20■□□□□ 0.79
SNED1Q8TER0 AC025048.3-201ENST00000590609 569 ntBASIC20■□□□□ 0.79
SNED1Q8TER0 AC005702.4-201ENST00000618393 416 ntBASIC20■□□□□ 0.79
SNED1Q8TER0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20■□□□□ 0.79
SNED1Q8TER0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SNED1Q8TER0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNED1Q8TER0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNED1Q8TER0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNED1Q8TER0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.99■□□□□ 0.79
SNED1Q8TER0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SNED1Q8TER0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNED1Q8TER0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNED1Q8TER0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SNED1Q8TER0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.99■□□□□ 0.79
SNED1Q8TER0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNED1Q8TER0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNED1Q8TER0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNED1Q8TER0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SNED1Q8TER0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNED1Q8TER0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.99■□□□□ 0.79
SNED1Q8TER0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNED1Q8TER0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.99■□□□□ 0.79
SNED1Q8TER0 HIST3H2BA-201ENST00000436555 524 ntBASIC19.99■□□□□ 0.79
SNED1Q8TER0 BNIP3P42-201ENST00000454982 569 ntBASIC19.99■□□□□ 0.79
SNED1Q8TER0 CROCCP4-201ENST00000457096 498 ntBASIC19.99■□□□□ 0.79
SNED1Q8TER0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.99■□□□□ 0.79
SNED1Q8TER0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.99■□□□□ 0.79
SNED1Q8TER0 BNIP3P29-201ENST00000598302 571 ntBASIC19.99■□□□□ 0.79
SNED1Q8TER0 TMEM261P1-201ENST00000604899 340 ntBASIC19.99■□□□□ 0.79
SNED1Q8TER0 AC011447.5-201ENST00000616168 564 ntBASIC19.99■□□□□ 0.79
SNED1Q8TER0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.99■□□□□ 0.79
SNED1Q8TER0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.99■□□□□ 0.79
SNED1Q8TER0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.99■□□□□ 0.79
SNED1Q8TER0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNED1Q8TER0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.99■□□□□ 0.79
SNED1Q8TER0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNED1Q8TER0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNED1Q8TER0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
SNED1Q8TER0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNED1Q8TER0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNED1Q8TER0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.98■□□□□ 0.79
SNED1Q8TER0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNED1Q8TER0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNED1Q8TER0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNED1Q8TER0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.97■□□□□ 0.79
SNED1Q8TER0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SNED1Q8TER0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SNED1Q8TER0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNED1Q8TER0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNED1Q8TER0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNED1Q8TER0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNED1Q8TER0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SNED1Q8TER0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.97■□□□□ 0.79
SNED1Q8TER0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.97■□□□□ 0.79
SNED1Q8TER0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.97■□□□□ 0.79
SNED1Q8TER0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.97■□□□□ 0.79
SNED1Q8TER0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNED1Q8TER0 AC092552.1-201ENST00000547243 906 ntBASIC19.97■□□□□ 0.79
SNED1Q8TER0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNED1Q8TER0 AC024267.1-201ENST00000582320 895 ntBASIC19.97■□□□□ 0.79
SNED1Q8TER0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.97■□□□□ 0.79
SNED1Q8TER0 AL139011.1-202ENST00000642063 584 ntBASIC19.97■□□□□ 0.79
SNED1Q8TER0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.97■□□□□ 0.79
SNED1Q8TER0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.97■□□□□ 0.79
SNED1Q8TER0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNED1Q8TER0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.97■□□□□ 0.79
SNED1Q8TER0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNED1Q8TER0 AC141586.5-201ENST00000624546 2050 ntBASIC19.97■□□□□ 0.79
SNED1Q8TER0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNED1Q8TER0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms