Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 GGT4P-201ENST00000623672 1708 ntBASIC17.62■□□□□ 0.41
UBA3Q8TBC4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 PMS2P4-201ENST00000412466 1052 ntBASIC17.62■□□□□ 0.41
UBA3Q8TBC4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 AC092865.5-201ENST00000545435 363 ntBASIC17.62■□□□□ 0.41
UBA3Q8TBC4 MTDHP5-201ENST00000598980 586 ntBASIC17.62■□□□□ 0.41
UBA3Q8TBC4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 AC091812.2-201ENST00000619081 385 ntBASIC17.62■□□□□ 0.41
UBA3Q8TBC4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA3Q8TBC4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 BX842568.4-201ENST00000421222 227 ntBASIC17.61■□□□□ 0.41
UBA3Q8TBC4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 ALG1L5P-201ENST00000482043 771 ntBASIC17.61■□□□□ 0.41
UBA3Q8TBC4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 AC010327.4-202ENST00000591484 748 ntBASIC17.61■□□□□ 0.41
UBA3Q8TBC4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.61■□□□□ 0.41
UBA3Q8TBC4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA3Q8TBC4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 AC112482.1-201ENST00000492080 688 ntBASIC17.6■□□□□ 0.41
UBA3Q8TBC4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 AC092902.6-201ENST00000641783 218 ntBASIC17.6■□□□□ 0.41
UBA3Q8TBC4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBA3Q8TBC4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms