Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 AC005622.1-201ENST00000636801 1703 ntBASIC17.8■□□□□ 0.44
LMO3Q8TAP4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 AC090340.1-201ENST00000620778 4980 ntBASIC17.79■□□□□ 0.44
LMO3Q8TAP4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 MED15P5-201ENST00000423150 992 ntBASIC17.79■□□□□ 0.44
LMO3Q8TAP4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LMO3Q8TAP4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 LINC02199-201ENST00000506655 2702 ntBASIC17.78■□□□□ 0.44
LMO3Q8TAP4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LMO3Q8TAP4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 MIR574-201ENST00000385209 96 ntBASIC17.77■□□□□ 0.44
LMO3Q8TAP4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 RNA5SP416-201ENST00000516838 111 ntBASIC17.77■□□□□ 0.44
LMO3Q8TAP4 PGAM5P1-201ENST00000518923 814 ntBASIC17.77■□□□□ 0.44
LMO3Q8TAP4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms