Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 TMEM14DP-201ENST00000422205 345 ntBASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 AL391256.1-201ENST00000443260 1855 ntBASIC18.16■□□□□ 0.5
KLHDC9Q8NEP7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 AL139010.1-201ENST00000454878 894 ntBASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 RRP7BP-205ENST00000566851 833 ntBASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 TMEM261P1-201ENST00000604899 340 ntBASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 WFDC1-204ENST00000613603 549 ntBASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KLHDC9Q8NEP7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
KLHDC9Q8NEP7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
KLHDC9Q8NEP7 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHDC9Q8NEP7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms