Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 AP002490.2-201ENST00000524791 560 ntBASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 AC109635.5-201ENST00000533593 962 ntBASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 MIR3909-201ENST00000579518 119 ntBASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 CYP2A7P1-201ENST00000595391 815 ntBASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 AC060834.1-201ENST00000443027 2032 ntBASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 RNU1-129P-201ENST00000384064 167 ntBASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 U1.21-201ENST00000580816 167 ntBASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 AL009183.1-201ENST00000603760 355 ntBASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 AC013467.2-201ENST00000605472 835 ntBASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 AL031055.1-201ENST00000606362 631 ntBASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH20Q8N6Y1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH20Q8N6Y1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 AC046158.3-201ENST00000624947 2558 ntBASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 AC099522.2-201ENST00000607001 744 ntBASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 AL161645.1-201ENST00000622716 1255 ntBASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms