Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 AL353705.2-201ENST00000428243 662 ntBASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 AL662799.1-202ENST00000614205 422 ntBASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 AL358472.5-202ENST00000641448 1267 ntBASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 UBALD1-205ENST00000590891 2641 ntBASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.08□□□□□ -0.15
RAI1Q7Z5J4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
RAI1Q7Z5J4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAI1Q7Z5J4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAI1Q7Z5J4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAI1Q7Z5J4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAI1Q7Z5J4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
RAI1Q7Z5J4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAI1Q7Z5J4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
RAI1Q7Z5J4 AC011676.5-201ENST00000624864 2660 ntBASIC14.08□□□□□ -0.15
RAI1Q7Z5J4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 SNX33P1-201ENST00000592116 1762 ntBASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 API5-211ENST00000534695 560 ntTSL 5 BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 AC027307.3-201ENST00000594262 1100 ntBASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 AC013467.2-201ENST00000605472 835 ntBASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 CETN4P-206ENST00000642099 2168 ntBASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAI1Q7Z5J4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 RNA5SP410-201ENST00000516285 106 ntBASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 CU639417.3-201ENST00000624240 1404 ntBASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.07□□□□□ -0.16
RAI1Q7Z5J4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms