Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 AC010491.1-201ENST00000563101 2797 ntBASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
KCNIP4Q6PIL6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
KCNIP4Q6PIL6 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 FAM197Y1-201ENST00000421178 764 ntBASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 CD177P1-201ENST00000606252 935 ntBASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 MIR6786-201ENST00000616843 113 ntBASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KCNIP4Q6PIL6 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
KCNIP4Q6PIL6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
KCNIP4Q6PIL6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms