Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 SNX33P1-201ENST00000592116 1762 ntBASIC21.16■□□□□ 0.98
NUP188Q5SRE5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 FO681548.1-201ENST00000455617 1132 ntBASIC21.15■□□□□ 0.98
NUP188Q5SRE5 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 AGER-203ENST00000375065 665 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 APRT-204ENST00000563655 709 ntTSL 5 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP188Q5SRE5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.14■□□□□ 0.98
NUP188Q5SRE5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.14■□□□□ 0.98
NUP188Q5SRE5 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 PKD1P6-201ENST00000343738 4769 ntBASIC21.14■□□□□ 0.97
NUP188Q5SRE5 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 NAT9-224ENST00000583757 583 ntTSL 3 BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 AP001350.2-201ENST00000625104 1094 ntBASIC21.14■□□□□ 0.97
NUP188Q5SRE5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUP188Q5SRE5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.13■□□□□ 0.97
NUP188Q5SRE5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 CALR4P-201ENST00000431943 946 ntBASIC21.13■□□□□ 0.97
NUP188Q5SRE5 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 AC105129.2-201ENST00000559536 390 ntBASIC21.13■□□□□ 0.97
NUP188Q5SRE5 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 AL033527.5-202ENST00000641632 1098 ntBASIC21.13■□□□□ 0.97
NUP188Q5SRE5 CDC14C-201ENST00000428251 1719 ntBASIC21.13■□□□□ 0.97
NUP188Q5SRE5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUP188Q5SRE5 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUP188Q5SRE5 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC21.12■□□□□ 0.97
NUP188Q5SRE5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC21.12■□□□□ 0.97
NUP188Q5SRE5 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUP188Q5SRE5 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
NUP188Q5SRE5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC21.12■□□□□ 0.97
NUP188Q5SRE5 BTNL10-201ENST00000595971 695 ntBASIC21.12■□□□□ 0.97
NUP188Q5SRE5 AC013467.2-201ENST00000605472 835 ntBASIC21.12■□□□□ 0.97
NUP188Q5SRE5 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NUP188Q5SRE5 AL391069.4-201ENST00000609583 481 ntBASIC21.12■□□□□ 0.97
NUP188Q5SRE5 SNX1-214ENST00000625244 324 ntTSL 5 BASIC21.12■□□□□ 0.97
NUP188Q5SRE5 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms